Preprints
https://doi.org/10.5194/egusphere-2025-453
https://doi.org/10.5194/egusphere-2025-453
21 Mar 2025
 | 21 Mar 2025

Developing an eco-physiological process-based model of soybean growth and yield (MATCRO-Soy v.1): Model calibration and evaluation

Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsusumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi

Abstract. MATCRO-Soy is an eco-physiological process-based crop model for soybean (Glycine max L. (Merr.)). It was developed by modifying the parameters of MATCRO-Rice. The original model, MATCRO-Rice, integrates crop growth processes with a land surface model. These modifications were made using data from literature and field experiments across the world. The reliability of the model was validated extensively by observed soybean yield data across the global, national, and grid cell levels. A moderate correlation was observed between the MATCRO-Soy and FAOSTAT yield data with correlation coefficients of 0.81 (p < 0.001) for the global average yield and 0.512 (p < 0.01) for the global average detrended yield over a 34-year period (1981–2014). Furthermore, the grid-cell level validation revealed that 71 % of the grid cells in the global yield map exhibited a statistically significant correlation between the MATCRO-Soy simulated yield and the derived from observational records. These results highlight the model’s ability to reproduce soybean yield under different environmental conditions, integrating soil water availability and nitrogen fertilizer. MATCRO-soy could enhance our understanding of crop physiology, especially, crop response to climate change and reduce uncertainty in climate change impacts on soybeans.

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Journal article(s) based on this preprint

20 Nov 2025
Developing an eco-physiological process-based model of soybean growth and yield (MATCRO-Soy v.1): model calibration and evaluation
Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsutsumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi
Geosci. Model Dev., 18, 8801–8826, https://doi.org/10.5194/gmd-18-8801-2025,https://doi.org/10.5194/gmd-18-8801-2025, 2025
Short summary
Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsusumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2025-453', Anonymous Referee #1, 12 May 2025
    • AC1: 'Reply on RC1', Astrid Yusara, 14 May 2025
  • RC2: 'Comment on egusphere-2025-453', Anonymous Referee #2, 02 Jun 2025
    • AC2: 'Reply on RC2', Astrid Yusara, 20 Jun 2025

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2025-453', Anonymous Referee #1, 12 May 2025
    • AC1: 'Reply on RC1', Astrid Yusara, 14 May 2025
  • RC2: 'Comment on egusphere-2025-453', Anonymous Referee #2, 02 Jun 2025
    • AC2: 'Reply on RC2', Astrid Yusara, 20 Jun 2025

Peer review completion

AR – Author's response | RR – Referee report | ED – Editor decision | EF – Editorial file upload
AR by Astrid Yusara on behalf of the Authors (02 Aug 2025)  Author's response   Author's tracked changes   Manuscript 
ED: Referee Nomination & Report Request started (12 Aug 2025) by Christian Folberth
RR by Anonymous Referee #2 (17 Sep 2025)
ED: Publish subject to minor revisions (review by editor) (18 Sep 2025) by Christian Folberth
AR by Astrid Yusara on behalf of the Authors (19 Sep 2025)  Author's response   Author's tracked changes   Manuscript 
ED: Publish subject to minor revisions (review by editor) (02 Oct 2025) by Christian Folberth
AR by Astrid Yusara on behalf of the Authors (11 Oct 2025)  Author's response   Author's tracked changes   Manuscript 
ED: Publish as is (14 Oct 2025) by Christian Folberth
AR by Astrid Yusara on behalf of the Authors (15 Oct 2025)  Author's response   Manuscript 

Post-review adjustments

AA – Author's adjustment | EA – Editor approval
AA by Astrid Yusara on behalf of the Authors (14 Nov 2025)   Author's adjustment   Manuscript
EA: Adjustments approved (17 Nov 2025) by Christian Folberth

Journal article(s) based on this preprint

20 Nov 2025
Developing an eco-physiological process-based model of soybean growth and yield (MATCRO-Soy v.1): model calibration and evaluation
Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsutsumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi
Geosci. Model Dev., 18, 8801–8826, https://doi.org/10.5194/gmd-18-8801-2025,https://doi.org/10.5194/gmd-18-8801-2025, 2025
Short summary
Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsusumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi

Model code and software

An eco-physiological process-based model for soy yield (MATCRO-Soy v.1) Astrid Yusara and Yuji Masutomi https://zenodo.org/records/14881385

Astrid Yusara, Tomomichi Kato, Elizabeth A. Ainsworth, Rafael Battisti, Etsushi Kumagai, Satoshi Nakano, Yushan Wu, Yutaka Tsusumi-Morita, Kazuhiko Kobayashi, and Yuji Masutomi

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Short summary
We developed a soybean model, an ecosystem model for crop yield (namely MATCRO-Soy), integrating crop response toward climate variable. It offers a detailed yield estimation. Parameter tuning in the model used literature and field experiments. The model shows a moderate correlation with observed yields at the global, national, and grid levels. Development of MATCRO-Soy enhances crop modeling diversity approaches, particularly in climate change impact studies.
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