Preprints
https://doi.org/10.5194/egusphere-2025-865
https://doi.org/10.5194/egusphere-2025-865
07 Mar 2025
 | 07 Mar 2025
Status: this preprint is open for discussion and under review for Geoscientific Model Development (GMD).

Offline Fennel: A High-Performance and Computationally Efficient Biogeochemical Model within the Regional Ocean Modeling System (ROMS)

Júlia Crespin, Jordi Solé, and Miquel Canals

Abstract. Ocean biogeochemical models are essential for advancing our understanding of oceanographic processes. Here we present the Offline Fennel model, an offline biogeochemical model implemented within the Regional Ocean Modeling System (ROMS). We evaluated the model performance against a fully coupled physical-biogeochemical online application in the Northern Gulf of Mexico, a region with an intense biogeochemical activity including rather frequent hypoxia events. By leveraging physical hydrodynamic outputs, we ran the Offline Fennel model using various time-step multiples from the coupled configuration, significantly enhancing computational efficiency. This approach reduced simulation time from 6 hours to approximately 30 minutes. The accuracy of the offline model was assessed using three different mixing schemes: the Generic Length Scale (GLS), Large–McWilliams–Doney (LMD, and Mellor and Yamada 2.5 (MY25). The offline model achieved an average skill score of 93 %, with minimal impact on performance from the time-step choice. While the GLS configuration yielded the highest accuracy, all three mixing schemes performed well. Although some discrepancies appeared between offline and coupled simulation outputs, these were smaller than those observed when using different mixing schemes within the same model configuration. The promising results achieved so far validate the Offline Fennel model’s capability and efficiency, thus offering a powerful tool for researchers aiming to conduct extensive biogeochemical simulations without rerunning the hydrodynamic component, thus significantly reducing computational demands.

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Júlia Crespin, Jordi Solé, and Miquel Canals

Status: open (until 02 May 2025)

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Júlia Crespin, Jordi Solé, and Miquel Canals

Model code and software

Offline Fennel: Offline biogeochemical model within the Regional Ocean Modeling System (ROMS) Júlia Crespin https://doi.org/10.5281/zenodo.14916223

Júlia Crespin, Jordi Solé, and Miquel Canals

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Short summary
This study presents the Offline Fennel model, a tool designed to simulate ocean biogeochemical processes efficiently. By using existing hydrodynamic data, the model significantly reduces computation time from 6 hours to just 30 minutes. We tested its accuracy in the Northern Gulf of Mexico and found it closely matches physical-biogeochemical coupled simulations. This model allows researchers to conduct more tests and simulations without the need for extensive computational resources.
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