Preprints
https://doi.org/10.5194/egusphere-2025-5251
https://doi.org/10.5194/egusphere-2025-5251
07 Nov 2025
 | 07 Nov 2025
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Ideas and perspectives: Mineralizing Fluid Control on Minor Elements in Biogenic CaCO3: Insights from Otoliths

Athina Kekelou, Gerald Langer, and Patrizia Ziveri

Abstract. The minor element composition of calcium carbonate (CaCO3) biominerals from marine calcifying organisms leaving a sedimentary record has been used for decades to reconstruct various biogeochemical parameters. Advancing geochemical proxies and understanding their underlying mechanisms is essential for climate reconstructions, environmental research, and investigations of biomineralization processes. Despite considerable success of proxy applications, limited mechanistic understanding still restricts their full potential. The problem is often summarized by the term "vital effect", i.e. minor element partitioning due to biological activity. The element partitioning from the calcifying fluid into the biomineral, however, is usually described in terms of inorganic precipitation of a mineral from an aqueous solution of inorganic ions. Although this assumption is central to many partitioning models it has not been tested because the calcifying fluid of classic proxy archives such as foraminifera, molluscs, and coccolithophores has not been successfully sampled for element analysis. The calcifying fluid of fish otolith formation (endolymph), by contrast, was sampled and chemically analysed accompanied by corresponding otolith data. However, previous datasets have not been compared to inorganic partitioning coefficients to test this assumption. In this study, we address this gap using published data from four fish species and six elements. Our results indicate that the final stage of otolith minor element incorporation is influenced by organic matter in the endolymph fluid and therefore cannot be considered purely inorganic. Our conclusion questions a central assumption of many minor element partitioning models. This does not imply that existing models are questionable, but that they share a common oversimplification. By removing this oversimplification all kinds of different models can be improved. Our study contributes broadly to the understanding of biogenic CaCO3 geochemistry, and it is relevant to the majority of existing models.

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Athina Kekelou, Gerald Langer, and Patrizia Ziveri

Status: open (until 19 Dec 2025)

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Athina Kekelou, Gerald Langer, and Patrizia Ziveri
Athina Kekelou, Gerald Langer, and Patrizia Ziveri
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Short summary
Fish otoliths formation is key for understanding the incorporation of elements into biominerals. It is often assumed that the final step of biomineralization consists of inorganic precipitation as the fluid where biominerals form can hardly be sampled. Thanks to fish ear anatomy this can be overcome with otoliths. By comparing otolith formation and inorganic precipitation, we proved that this assumption is not always true. Our findings could refined models and shed light on biomineralization.
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