Preprints
https://doi.org/10.5194/egusphere-2025-5003
https://doi.org/10.5194/egusphere-2025-5003
29 Oct 2025
 | 29 Oct 2025

Denitrification as the predominant process in nitrous oxide production in the water column of two eutrophic reservoirs

Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche

Abstract. Reservoirs are important sites for nitrogen cycling and a significant global source of the potent greenhouse gas nitrous oxide (N2O) to the atmosphere. They receive nitrogen inputs from agriculture and urban sources, boosting the production of N2O by nitrification, denitrification, and photochemodenitrification. However, existing estimates of N2O production in reservoirs are uncertain because previous studies have mainly focused on N2O in rivers or lake sediments, often overlooking the water column of lentic systems. Here, we employed stable isotope tracer incubations alongside analyses of in situ natural abundance of nitrogen pools and functional genes involved in nitrification (amoA) and denitrification (nirS), to study N2O production in the water column of two eutrophic reservoirs with contrasting morphometries. We used 15N-NH4+ and 15N-NO3- tracers to quantify rates of N2O production, nitrification, and nitrate reduction at the beginning and the end of the stratification period. Notably, nitrate concentration decreased by up to 49 % over the two months. N2O production from ammonium ranged from 0.02 to 48.6 nmol-N L-1 d-1, while N2O from nitrate varied from 0.2 to 61.0 nmol-N L-1 d-1. High rates of nitrification, nitrate reduction to nitrite, and rapid nitrite turnover were observed, with total N2O production significantly correlated with the abundance of the nirS gene. A strong positive correlation was found between δ15Ν-NO2- and both N2O concentration and nirS abundance. Overall, these findings suggest that reservoirs are active sites for N2O production and N loss, with denitrification playing a significant role in the water column.

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Journal article(s) based on this preprint

12 Jun 2026
| Highlight paper
Denitrification as the dominant process in nitrous oxide production in the water column of two eutrophic reservoirs
Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche
Biogeosciences, 23, 3887–3905, https://doi.org/10.5194/bg-23-3887-2026,https://doi.org/10.5194/bg-23-3887-2026, 2026
Short summary Editorial statement
Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2025-5003', Anonymous Referee #1, 02 Dec 2025
    • AC1: 'Reply on RC1', Elizabeth Leon-Palmero, 19 Jan 2026
  • RC2: 'Comment on egusphere-2025-5003', Anonymous Referee #2, 04 Dec 2025
    • AC2: 'Reply on RC2', Elizabeth Leon-Palmero, 19 Jan 2026

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2025-5003', Anonymous Referee #1, 02 Dec 2025
    • AC1: 'Reply on RC1', Elizabeth Leon-Palmero, 19 Jan 2026
  • RC2: 'Comment on egusphere-2025-5003', Anonymous Referee #2, 04 Dec 2025
    • AC2: 'Reply on RC2', Elizabeth Leon-Palmero, 19 Jan 2026

Peer review completion

AR – Author's response | RR – Referee report | ED – Editor decision | EF – Editorial file upload
ED: Reconsider after major revisions (23 Feb 2026) by Wei Wen Wong
AR by Elizabeth Leon-Palmero on behalf of the Authors (05 Mar 2026)  Author's response   Author's tracked changes   Manuscript 
ED: Publish as is (24 Mar 2026) by Wei Wen Wong
AR by Elizabeth Leon-Palmero on behalf of the Authors (06 Apr 2026)  Manuscript 

Journal article(s) based on this preprint

12 Jun 2026
| Highlight paper
Denitrification as the dominant process in nitrous oxide production in the water column of two eutrophic reservoirs
Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche
Biogeosciences, 23, 3887–3905, https://doi.org/10.5194/bg-23-3887-2026,https://doi.org/10.5194/bg-23-3887-2026, 2026
Short summary Editorial statement
Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche
Elizabeth Leon-Palmero, Claudia Frey, Bess B. Ward, Rafael Morales-Baquero, and Isabel Reche

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Short summary
Reservoirs act as nitrogen sinks and emit nitrous oxide, a potent greenhouse gas and major ozone-depleting substance. We studied two reservoirs and found that nitrification and denitrification produce nitrous oxide in the water column, but denitrification is the main source, fueled by fresh organic matter from phytoplankton. Our results also suggest that nitrous oxide is actively consumed. This study highlights the need to include reservoirs in global nitrous oxide budgets.
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