Preprints
https://doi.org/10.5194/egusphere-2026-959
https://doi.org/10.5194/egusphere-2026-959
03 Mar 2026
 | 03 Mar 2026
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Fate of legacy ammonium in the coastal Baltic Sea

Dana Hellemann, Xiaole Sun, Tom Jilbert, Eva Ehrnsten, Lora Harris, Bo Gustafsson, Christoph Humborg, and Alf Norkko

Abstract. Eutrophication has enriched coastal sediments globally with organic matter (OM), fuelling internal nutrient loading once benthic hypoxia occurs. Internal ammonium (NH4+) loading may be particularly prominent in the coastal Baltic Sea due to the existence of a substantial NH4+ pool in its sediments, accumulated via OM burial and mineralization over long-term eutrophication. However, despite its potential to exacerbate eutrophication, internal NH4+ loading has so far received little attention in the coastal Baltic Sea. It remains poorly understood for how long the benthic legacy OM may affect both the benthic NH4+ pool and the internal NH4+ loading via sediment-water NH4+ effluxes, especially under varying oxygen availabilities. To reconstruct past and predict future NH4+ effluxes in response to different OM loading and bottom water oxygen conditions, we developed a reactive transport model for muddy, organic-rich sediments of the coastal Baltic Sea. Our model results suggest that the legacy OM in the coastal sediments is the key driver sustaining benthic NH4+ pools and effluxes both today and well into the future. As today’s OM loading is constantly adding new OM to the already existing legacy loading, the benthic NH4+ pool will continuously grow and result in persistently elevated NH4+ effluxes in the future, even under oxic conditions. If external measures strongly reduce OM loading to eventually pre-industrial levels, the NH4+ pool still continues to grow for at least 80 years due to the continued mineralization of legacy OM, which keeps NH4+ effluxes elevated for at least 180 years before eventually returning to pre-industrial levels in the year 2300. These model results highlight the persistence of eutrophication legacy effects and their importance for ecosystem management of the coastal Baltic Sea. The knowledge obtained is beneficial also for other anthropogenically impacted coastal seas with similar geomorphology as the Baltic Sea.

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Dana Hellemann, Xiaole Sun, Tom Jilbert, Eva Ehrnsten, Lora Harris, Bo Gustafsson, Christoph Humborg, and Alf Norkko

Status: open (until 14 Apr 2026)

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Dana Hellemann, Xiaole Sun, Tom Jilbert, Eva Ehrnsten, Lora Harris, Bo Gustafsson, Christoph Humborg, and Alf Norkko

Data sets

The OC forcing and outputs of the reactive transport model for assessing the N legacy effect in coastal Baltic Sea Xiaole Sun and Dana Hellemann https://doi.org/10.5281/zenodo.17082147

Model code and software

The OC forcing and outputs of the reactive transport model for assessing the N legacy effect in coastal Baltic Sea Xiaole Sun and Dana Hellemann https://doi.org/10.5281/zenodo.17082147

Dana Hellemann, Xiaole Sun, Tom Jilbert, Eva Ehrnsten, Lora Harris, Bo Gustafsson, Christoph Humborg, and Alf Norkko
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Latest update: 03 Mar 2026
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Short summary
Using model-simulations and field data, we assess the effect of past eutrophication on present and future ammonium dynamics in coastal sediments of the Baltic Sea and their impact on the coastal ecosystem. Our results indicate a clear eutrophication legacy effect on the persistence of ammonium being released from the sediment to the water column, particularly under oxygen deficiency, with long-lasting effects into the far future and thus important implications for ecosystem recovery measures.
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