Preprints
https://doi.org/10.5194/egusphere-2026-855
https://doi.org/10.5194/egusphere-2026-855
06 Mar 2026
 | 06 Mar 2026
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Ammonium and nitrite oxidation in the upper euphotic zone of the oligotrophic Red Sea

Eyal Rahav, Scott D. Wankel, and Adina Paytan

Abstract. Nitrification is widely understood to be inhibited by light in the surface ocean, however, increasing evidence indicates its occurrence at low levels at many sites. The extent to which nitrification remains active in the euphotic zone could have important implications to new production calculations, yet it remains understudied. Here, we quantified ammonium and nitrite oxidation rates in the euphotic zone of the Gulf of Aqaba (Northern Red Sea) from late spring to late summer and examined environmental controls and implications for dark carbon fixation (chemoautotrophy) and new production. Both ammonium and nitrite oxidation were detectable throughout the euphotic zone (~0.1–0.8 nmol N L-1 d-1). Overall, rates increased with depth and were strongly suppressed in the highest irradiance surface waters. Integrated rates over the entire euphotic zone (24–56 µmol N m-2 d-1) were among the lowest reported for oligotrophic regions globally. This reflects extremely low substrate concentrations and intense, though not complete, photoinhibition. Ammonium and nitrite oxidation together supported <2 % of chemoautotrophic activity, suggesting other processes, not accounted for, such as anaplerosis may be important. Depth-resolved correlations with environmental parameters highlight light, temperature, and substrate availability as key regulators of both processes. Our results show that nitrification in the Gulf of Aqaba operates at the lower bounds of global euphotic zone rates and is loosely coupled to carbon cycling. These findings underscore the need to better resolve nitrification dynamics in ultra-oligotrophic, rapidly warming, seas to refine estimates of new production and chemoautotrophic carbon assimilation under future ocean conditions.

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Eyal Rahav, Scott D. Wankel, and Adina Paytan

Status: open (until 17 Apr 2026)

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Eyal Rahav, Scott D. Wankel, and Adina Paytan
Eyal Rahav, Scott D. Wankel, and Adina Paytan
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Short summary
Microbes in the sunlit waters of the nitrogen-poor northern Red Sea transform ammonia into other forms of nitrogen, a process once thought to be almost absent in surface waters. We found that this activity does occur, but at very low rates. Additionally, these microbes contribute only a small share to carbon production, yet they recycle nitrogen and influence how scientists estimate ocean productivity in a warming world.
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