Status: this preprint is open for discussion and under review for Geoscientific Model Development (GMD).
How Much Lossy Compression of Training Data Can An Atmosphere Emulator Tolerate?
Finn Rebassoo,Peter Caldwell,Peter Lindstrom,Allison Baker,and Elynn Wu
Abstract. Training machine learning (ML) emulators on km-scale Earth system models (ESMs) would require more data than is practical to store. Lossy data compression is a natural solution to this problem, but adoption by the ESM community has been slow, partly because of the fear of negatively impacting scientific conclusions. In this study, we demonstrate what level of lossy compression is acceptable for an ML-based emulator of the E3SMv3 atmospheric model at 1° resolution. We specifically use the ZFP compressor, which provides state-of-the-art performance and is integrated into NetCDF4. Thus, ZFP can be applied to the E3SM data output directly and the compressed data read easily with Python tools. We measure lossy compression impact by looking at the skill of the ACE2-emulator for AMIP-like runs. We find that a compression rate of roughly 5x does not affect the physics predictions of the ACE2-emulator. As we compress the data more aggressively, some metrics start to degrade, and at a compression rate of 11x many metrics have become unacceptable.
Received: 02 Nov 2026 – Discussion started: 05 Nov 2026
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Machine-learning models can learn to approximate Earth system simulations and run them much faster. However, these models must be trained on large amounts of stored data, which grow enormously at higher resolution. This paper explores reducing the data needed for training using data compression. Training data compressed to one fifth the size of the original gave the same accuracy as the uncompressed training data. This could make training on high-resolution Earth system models more practical.
Machine-learning models can learn to approximate Earth system simulations and run them much...