Preprints
https://doi.org/10.5194/egusphere-2026-5605
https://doi.org/10.5194/egusphere-2026-5605
05 Oct 2026
 | 05 Oct 2026
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Biogeochemical and hydrological controls on the oxygen isotopic composition of nitrification-produced nitrate in an agricultural soil

Minghui Sha and Zhongjie Yu

Abstract. The oxygen isotopic composition of nitrate (NO₃⁻) produced by nitrification (δ¹⁸ONO3,nit) establishes the initial isotopic signature of NO₃⁻ in environmental systems and provides a baseline for tracing NO₃⁻ sources and subsequent transformations. However, how δ¹⁸ONO3,nit and its relationship with water δ¹⁸O (δ¹⁸OH2O) vary with temperature and substrate availability in agricultural soils remains poorly constrained. Moreover, soil evaporation can enrich δ18OH2O in surface soils where nitrification is most active, yet how this enrichment influences δ¹⁸ONO3,nit under contrasting hydrological conditions remains unexplored. To address these gaps, we integrated soil incubation experiments with a synthetic transport modeling framework based on StorAge Selection (SAS) functions to quantify how biogeochemical and hydrological factors regulate the variability and predictability of δ¹⁸ONO3,nit in an agricultural soil. The incubation experiments showed that, across wide ranges of temperature (7–35 °C) and ammonium (NH4+) availability (0–98 mg N kg⁻¹ soil), δ¹⁸ONO3,nit generally tracked soil δ¹⁸OH2O but varied by 3.4–5.3 ‰ at a given δ¹⁸OH2O. Temperature and NH4+ availability influenced δ¹⁸ONO3,nit primarily by regulating transient nitrite (NO2⁻) accumulation, which enhanced NO2⁻–water oxygen isotope exchange and thereby altered the expression of the associated equilibrium isotope effect. Synthetic transport modeling further revealed that hydrological processes can generate δ¹⁸ONO3,nit variability comparable in magnitude to that produced by biogeochemical controls. Because δ¹⁸ONO3,nit records the δ¹⁸O of water in nitrification zones at the time of NO₃⁻ production, whereas drainage δ18OH2O is additionally shaped by the mixing of water transported through heterogeneous flow paths, using drainage δ18OH2O to predict δ¹⁸ONO3,nit can produce systematic biases, particularly when seasonal nitrification dynamics interact with soil evaporation and water transport. Overall, our results show that δ¹⁸ONO3,nit in soil is jointly controlled by biogeochemical processes that regulate the expression of kinetic and equilibrium isotope effects during nitrification and by hydrological processes that determine the sources, ages, and flow paths of water supplying nitrification. These findings underscore the need to move beyond stream-centric approaches toward reactive transport frameworks that explicitly accounts for dynamic biogeochemical controls across diverse flow paths and water ages when applying NO₃⁻ isotopes to environmental systems.

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Minghui Sha and Zhongjie Yu

Status: open (until 16 Nov 2026)

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Minghui Sha and Zhongjie Yu

Data sets

Biogeochemical and hydrological controls on the oxygen isotopic composition of nitrification-produced nitrate in an agricultural soil [dataset] Minghui Sha and Zhongjie Yu https://zenodo.org/records/22684050

Model code and software

Biogeochemical and hydrological controls on the oxygen isotopic composition of nitrification-produced nitrate in an agricultural soil [code] Minghui Sha and Zhongjie Yu https://zenodo.org/records/22740286

Minghui Sha and Zhongjie Yu

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Short summary
Microbial nitrification is a dominant source of nitrate, and the oxygen isotope signature generated during this process can trace nitrogen sources and transformations in the environment. We combined soil experiments with models to assess how temperature, substrate supply, evaporation, and soil water movement shape this signature. Our results reveal substantial variability driven by these interacting factors and highlight their importance for predicting the isotopic signature in field studies.
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