Preprints
https://doi.org/10.5194/egusphere-2026-5013
https://doi.org/10.5194/egusphere-2026-5013
04 Sep 2026
 | 04 Sep 2026
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

A Framework for Representing Biodegradation in Atmospheric Multiphase Models

Leslie Nuñez López, Pierre Amato, and Barbara Ervens

Abstract. Biodegradation is a key process in natural ecosystems through which microorganisms recycle organic matter. Cloud water can host metabolically active microorganisms, opening the possibility that biodegradation contributes to atmospheric processing of organics. However, the extent to which microbial activity occurs in the atmosphere and modifies carbon budgets, and the parameters that control the rates, remain poorly constrained. We present a framework to quantify the key parameters of biodegradation of six major cloud-water organics (methanol, ethanol, formaldehyde, acetaldehyde, formic and acetic acids) and for unspecified organics. Using a multiphase box model, we perform sensitivity analyses to evaluate the dependence of biodegradation rates on bacterial abundance (Nbact), Henry's law constants (KH(eff)) and biodegradation rate constants (kbact). Biodegradation scales proportionally with Nbact, while fits indicate weaker sensitivities to KH(eff) and kbact with slopes of 0.89 and 0.39 in log–log space, respectively. Biodegradation of compounds with KH > 105 M atm−1 and/or kbact > 2 × 10−13 L cell−1 s−1 is limited by insufficient substrate replenishment in bacteria-containing droplets. Biodegradation rates normalized by cell concentration are consistent in magnitude with values reported for other aqueous environments, resulting in an effective rate constant of kbact,DOM ~10−13 L cell−1 s−1 for dissolved organic matter (DOM). Comparison of predicted biodegradation rates with atmospheric chemical loss processes and biodegradation in other aquatic environments indicates that atmospheric biodegradation may be a significant sink for some individual compounds (C2H5OH, HCOOH, CH3COOH) but generally represents a minor sink (< 1 %) under the conditions explored. Overall, the empirical relationships and sensitivities derived here provide a framework for implementing biodegradation in atmospheric multiphase models of different complexity, enabling assessment not only of its contribution to atmospheric carbon cycling but also of how environmental conditions may affect microbial functioning of the airborne portion of Earth' microbiome.

Competing interests: At least one of the (co-)authors is a member of the editorial board of Biogeosciences.

Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.
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Leslie Nuñez López, Pierre Amato, and Barbara Ervens

Status: open (until 16 Oct 2026)

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Leslie Nuñez López, Pierre Amato, and Barbara Ervens
Leslie Nuñez López, Pierre Amato, and Barbara Ervens
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Short summary
Clouds contain microorganisms that can biodegrade organics, potentially influencing the atmospheric carbon cycle. We present a framework to estimate biodegradation rates for common cloud-water constituents and shows that microbial abundance is the main controlling factor. Overall, biodegradation is a minor atmospheric sink, only important for a few individual compounds. These findings improve estimates of atmospheric sinks and help advance our understanding of airborne microbial activity.
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