Preprints
https://doi.org/10.5194/egusphere-2026-4919
https://doi.org/10.5194/egusphere-2026-4919
17 Sep 2026
 | 17 Sep 2026
Status: this preprint is open for discussion and under review for Geoscientific Model Development (GMD).

Biome.jl v0.1.0: a modular platform for mechanistic biome modeling and hypothesis testing

Capucine Marie Sophie Lechartre, Victor Boussange, Dirk Nikolaus Karger, Jed Oliver Kaplan, Philipp Brun, and Niklaus Emmanuel Zimmermann

Abstract. Many global vegetation and biome models represent plant diversity through plant functional types (PFTs) and physiological processes. To map biomes, established models rely on fixed PFT definitions and established biome attribution schemes, which limit their adaptability to investigate new questions. Increased availability of high-resolution climate and species distribution datasets, as well as advanced computational power, now enable regional parameterization and conceptual extension of biome models, but this potential remains underutilized. Here, we present Biome.jl, a framework that unifies climate-based biome classification and mechanistic simulations of biological processes within a single, modular engine. The Biome.jl framework introduces a generalized dominance-based competition scheme in which the attribution of model pixels to a biome is determined by environmental suitability, potential productivity of PFTs, rules to translate PFTs to biomes, and biome dominance hierarchies. We evaluate Biome.jl against independent datasets, demonstrating that improved flexibility does not come at the cost of predictive power. We then illustrate the framework's customizability through two case studies: a regional parameterization of PFTs using multi-parametric grid search inference based on empirical data, and an extension of the base model with a novel stem succulent PFT and biome definition, achieved without modifying model components. By facilitating the comparison of biome concepts, offering flexible functional parameterization, and supporting multi-resolution implementation, Biome.jl redefines equilibrium biome modeling as a modular, hypothesis- and data-driven endeavor. It provides a foundation for testing climate-vegetation relationships and exploring uncertainty in biome projections under past, current, and future environmental conditions.

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Capucine Marie Sophie Lechartre, Victor Boussange, Dirk Nikolaus Karger, Jed Oliver Kaplan, Philipp Brun, and Niklaus Emmanuel Zimmermann

Status: open (until 12 Nov 2026)

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Capucine Marie Sophie Lechartre, Victor Boussange, Dirk Nikolaus Karger, Jed Oliver Kaplan, Philipp Brun, and Niklaus Emmanuel Zimmermann
Capucine Marie Sophie Lechartre, Victor Boussange, Dirk Nikolaus Karger, Jed Oliver Kaplan, Philipp Brun, and Niklaus Emmanuel Zimmermann
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Latest update: 17 Sep 2026
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Short summary
Predicting how vegetation distribution responds to climate requires models that can be adapted to different regions and ecological questions. We present Biome.jl, a mechanistic modeling framework that allows customizing vegetation types, simulating their distribution, testing alternative biome concepts, and parameterizing the model using observational data. We demonstrate its capacity with case studies, predicting tree lines in the Swiss Alps and reproducing the distribution of stem succulents.
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