Preprints
https://doi.org/10.5194/egusphere-2026-3594
https://doi.org/10.5194/egusphere-2026-3594
05 Aug 2026
 | 05 Aug 2026
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Phytoplankton community, seasonality, and water chemistry modulate the lacustrine diurnal carbon engine and carbonate δ13C values

Cedric J. Hagen, Elizabeth J. Trower, Andrea Halling, Sarah J. Hurley, Spruce W. Schoenemann, Miquela Ingalls, and Kathryn E. Snell

Abstract. Stable isotopic measurements of carbon in carbonate rocks (δ13Ccarb) have long been used to investigate paleoclimate and global carbon cycle dynamics. Recent work documented the diurnal carbon engine effect, which describes the impact of daily photosynthetic cyclicity on dissolved inorganic carbon (DIC) and, in turn, δ13Ccarb and δ13CDIC values, in low-latitude shallow marine environments. Because carbonate precipitation is temporally structured over the diurnal cycle, the resulting δ13Ccarb reflects a precipitation-weighted bias rather than a simple daily average. However, this system has not yet been explored in lakes. Here we present an adapted diurnal carbon engine model and constrain this effect for three end-member lake systems: Great Salt Lake (UT, USA), Green Lake (NY, USA), and Morrison Lake (MT, USA). We document how differing lake water chemistry and phytoplankton communities modulate local diurnal carbon engines. Because of geochemical and ecological differences, the impact of the diurnal carbon engine on δ13Ccarb values varies greatly by lake system. We estimated Δ¹³C offsets, which represent the daily variability expected resulting from the diurnal engine and precipitation weighting, of ~0.36 ‰ in Great Salt Lake and ~0.24 ‰ in Green Lake. We also modeled how seasonality impacts the diurnal carbon engine in Great Salt Lake, which resulted in ~0.10 ‰ of δ13Ccarb variability. Modeled diurnal variability is consistent with observed dynamics in Green Lake. Predicted δ13Ccarb values are consistent with those measured from most carbonate sedimentary facies in each lake. Lacustrine δ13Ccarb shifts may reflect local environmental and ecological conditions, rather than changes in long-term lake δ13CDIC values or the global carbon cycle, complicating lacustrine δ13Ccarb record interpretations.

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Cedric J. Hagen, Elizabeth J. Trower, Andrea Halling, Sarah J. Hurley, Spruce W. Schoenemann, Miquela Ingalls, and Kathryn E. Snell

Status: open (until 16 Sep 2026)

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Cedric J. Hagen, Elizabeth J. Trower, Andrea Halling, Sarah J. Hurley, Spruce W. Schoenemann, Miquela Ingalls, and Kathryn E. Snell

Model code and software

Lakes_d13C: Lakes C isotope model, v2 Cedric Hagen and Lizzy Trower https://doi.org/10.5281/zenodo.20128480

Cedric J. Hagen, Elizabeth J. Trower, Andrea Halling, Sarah J. Hurley, Spruce W. Schoenemann, Miquela Ingalls, and Kathryn E. Snell
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Latest update: 05 Aug 2026
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Short summary
Scientists often read shifts in the chemistry of lake limestones as signs of past global change. We built a free computer model showing that a lake's own algae, its productivity, and its water can create these shifts locally instead. Because the mineral forms fastest at certain times of day, the timing of its formation, not just daily ups and downs, shapes the signal. This means local lake conditions can mimic global change and mislead our reading of Earth's past.
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