Preprints
https://doi.org/10.5194/egusphere-2025-5530
https://doi.org/10.5194/egusphere-2025-5530
21 Nov 2025
 | 21 Nov 2025
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Chiral Volatile Organic Compound Fluxes from Soil in the Amazon Rainforest across seasons

Johanna M. Schüttler, Giovanni Pugliese, Joseph Byron, Cléo Quaresma Dias-Júnior, Carolina de A. Monteiro, Hartwig Harder, Jos Lelieveld, and Jonathan Williams

Abstract. The rainforest floor is an underexplored source and sink of biogenic volatile organic compounds (BVOC), and its contribution to the ecosystem BVOC budget remains poorly understood. We performed multi-seasonal measurements in the Amazon rainforest on the soil-atmosphere exchange of enantiomer-resolved monoterpenes (C10H16) and sesquiterpenes (C15H24), isoprene, and two isoprene oxidation products: methacrolein and methyl vinyl ketone. Soil uptake of isoprene and isoprene oxidation products was stronger during dry seasons than wet seasons and peaked in the afternoon hours. Sesquiterpene emission was highest during the El Niño- influenced dry season. Monoterpene fluxes showed changes in speciation across seasons. The presence or removal of the litter layer strongly altered the speciation of the monoterpene and sesquiterpene fluxes, partly shifting from emission with the litter layer to uptake without it. At the same time, the litter had no significant effect on isoprene. Enantiomeric ratios of α-pinene, limonene, β-pinene, and camphene differed between soil emissions and ambient air and shifted seasonally, suggesting distinct soil sources and processes. For each sesquiterpene only one enantiomer was detected. Although soil BVOC fluxes contribute little to the overall atmospheric budget in rainforests dominated by the plant canopy, they may affect near-surface chemistry and play important roles in soil ecology.

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Johanna M. Schüttler, Giovanni Pugliese, Joseph Byron, Cléo Quaresma Dias-Júnior, Carolina de A. Monteiro, Hartwig Harder, Jos Lelieveld, and Jonathan Williams

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Johanna M. Schüttler, Giovanni Pugliese, Joseph Byron, Cléo Quaresma Dias-Júnior, Carolina de A. Monteiro, Hartwig Harder, Jos Lelieveld, and Jonathan Williams

Data sets

Soil fluxes and volume mixing ratios (VMR) of volatile organic compounds (VOCs) measured at the ATTO Site in 2023 and 2024 J. M. Schüttler et al. https://doi.org/10.17871/ATTO.612.7.2472

Johanna M. Schüttler, Giovanni Pugliese, Joseph Byron, Cléo Quaresma Dias-Júnior, Carolina de A. Monteiro, Hartwig Harder, Jos Lelieveld, and Jonathan Williams

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Short summary
We measured how Amazon rainforest soils release and uptake compounds commonly produced by plants across seasons, including the severe 2023 El Niño drought. Soils took up isoprene most in the afternoon of dry seasons, while emissions of very reactive sesquiterpenes peaked during the drought. Removing the leaf litter changed which compounds transferred to and from the soil. These soil exchanges, though small compared to the canopy, can shape air chemistry near the ground and influence soil biota.
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