the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Machine-learning models of δ13C and δ15N isoscapes in Amazonian wood
Abstract. Illegal logging is one of the most prevalent environmental infractions in the Amazon, led by organized networks that cause substantial ecological and economic impacts. Official control mechanisms, such as Brazil’s Forest Origin Document (DOF), remain vulnerable to the fraudulent manipulation of virtual timber credits and inconsistencies in digital traceability. These deficiencies highlight the need for independent, scientifically based methodologies for timber traceability that can support law enforcement and ensure reliable provenance verification. Here, we tested whether the isotopic composition of carbon (δ13C) and nitrogen (δ15N) in wood can trace Amazonian timber origin. We developed basin-wide δ13C and δ15N isoscapes using machine-learning models to predict spatial variability. A total of 571 trees from 47 sites were analyzed for both isotopes. Tree disks or wedges were sampled from the basal trunk, sectioned transversely, and sub-sampled from heartwood to near the sapwood boundary to obtain whole-tree isotopic composition. The δ13C and, more strongly, the δ15N values exhibited substantial within-site heterogeneity, indicating individual-level physiological controls, interspecific differences, and/or small-scale environmental variation influencing isotope fractionation. Despite these sources of noise, isotopic values showed independent and predictable spatial patterns across the basin (R2 = 0.67 for δ15N and R2 = 0.60 for δ13C). Nitrogen isotopes were primarily controlled by edaphic factors, while carbon isotopes revealed a broad longitudinal gradient linked to climate. Together, these isotopic markers provide complementary information for basin-scale timber provenancing and form a robust, high-resolution framework for Amazon-wide traceability.
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Status: open (until 25 Dec 2025)
- RC1: 'Comment on egusphere-2025-5452', Anonymous Referee #1, 09 Dec 2025 reply
Data sets
Research compendium for 'Machine-learning models of δ¹³C and δ¹⁵N isoscapes in Amazonian wood' Isabela M. Souza-Silva and Clément P. Bataille https://osf.io/u5rws/overview
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The manuscript describes an extensive sampling of 15N and 13C in wood across the Amazon. A major goal of the project is to investigate whether isotopes can be used to provenance lumber, with relevance to monitoring illegal logging. Towards this goal, random forests models are fitted to the isotope datasets using a large suite of assembled spatial, ecological, pedological, and climatological covariates. RF models are subsequently used to produce isoscapes: spatially resolved isotope predictions across the Amazon. Patterns of isoscape variation are discussed in the context of various ecological factors.
Major comments
Line 123. Perhaps worth explaining how a sample was collected 215 km from a road, and how frequent such samples are in the dataset. I am imagining this was transported by boat? Then could redefine as distance from road or river?
Fig 1. This figure could be made more useful by somehow depicting sample size at each site, either as point size / color or with a number. This would allow visualization of the distribution of sampling intensity across the region.
L349. You might refer to this as bias. 13C isoscape also exhibits the same bias.
L440. Many sites have 13c variation of around 3-4 per mil. So while I suppose this is true, inter-site variability is not much greater than within site.