Preprints
https://doi.org/10.5194/egusphere-2025-5452
https://doi.org/10.5194/egusphere-2025-5452
13 Nov 2025
 | 13 Nov 2025
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Machine-learning models of δ13C and δ15N isoscapes in Amazonian wood

Isabela M. Souza-Silva, Luiz A. Martinelli, Brent Holmes, Ana C. G. Batista, Maria G. S. Araújo, Anna L. Garção, Stéphane Ponton, Peter Groenendijk, Giuliano M. Locosselli, Daigard R. O. Ortega-Rodriguez, Deoclecio J. Amorim, Fábio J. V. Costa, Gabriela B. Nardoto, Alexandre T. Brunello, Vladimir Eliodoro Costa, Gabriel Assis-Pereira, Mario Tomazello-Filho, Niro Higuchi, Ana C. Barbosa, João Paulo Sena-Souza, and Clément P. Bataille

Abstract. Illegal logging is one of the most prevalent environmental infractions in the Amazon, led by organized networks that cause substantial ecological and economic impacts. Official control mechanisms, such as Brazil’s Forest Origin Document (DOF), remain vulnerable to the fraudulent manipulation of virtual timber credits and inconsistencies in digital traceability. These deficiencies highlight the need for independent, scientifically based methodologies for timber traceability that can support law enforcement and ensure reliable provenance verification. Here, we tested whether the isotopic composition of carbon (δ13C) and nitrogen (δ15N) in wood can trace Amazonian timber origin. We developed basin-wide δ13C and δ15N isoscapes using machine-learning models to predict spatial variability. A total of 571 trees from 47 sites were analyzed for both isotopes. Tree disks or wedges were sampled from the basal trunk, sectioned transversely, and sub-sampled from heartwood to near the sapwood boundary to obtain whole-tree isotopic composition. The δ13C and, more strongly, the δ15N values exhibited substantial within-site heterogeneity, indicating individual-level physiological controls, interspecific differences, and/or small-scale environmental variation influencing isotope fractionation. Despite these sources of noise, isotopic values showed independent and predictable spatial patterns across the basin (R2 = 0.67 for δ15N and R2 = 0.60 for δ13C). Nitrogen isotopes were primarily controlled by edaphic factors, while carbon isotopes revealed a broad longitudinal gradient linked to climate. Together, these isotopic markers provide complementary information for basin-scale timber provenancing and form a robust, high-resolution framework for Amazon-wide traceability.

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Isabela M. Souza-Silva, Luiz A. Martinelli, Brent Holmes, Ana C. G. Batista, Maria G. S. Araújo, Anna L. Garção, Stéphane Ponton, Peter Groenendijk, Giuliano M. Locosselli, Daigard R. O. Ortega-Rodriguez, Deoclecio J. Amorim, Fábio J. V. Costa, Gabriela B. Nardoto, Alexandre T. Brunello, Vladimir Eliodoro Costa, Gabriel Assis-Pereira, Mario Tomazello-Filho, Niro Higuchi, Ana C. Barbosa, João Paulo Sena-Souza, and Clément P. Bataille

Status: open (until 25 Dec 2025)

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Isabela M. Souza-Silva, Luiz A. Martinelli, Brent Holmes, Ana C. G. Batista, Maria G. S. Araújo, Anna L. Garção, Stéphane Ponton, Peter Groenendijk, Giuliano M. Locosselli, Daigard R. O. Ortega-Rodriguez, Deoclecio J. Amorim, Fábio J. V. Costa, Gabriela B. Nardoto, Alexandre T. Brunello, Vladimir Eliodoro Costa, Gabriel Assis-Pereira, Mario Tomazello-Filho, Niro Higuchi, Ana C. Barbosa, João Paulo Sena-Souza, and Clément P. Bataille

Data sets

Research compendium for 'Machine-learning models of δ¹³C and δ¹⁵N isoscapes in Amazonian wood' Isabela M. Souza-Silva and Clément P. Bataille https://osf.io/u5rws/overview

Isabela M. Souza-Silva, Luiz A. Martinelli, Brent Holmes, Ana C. G. Batista, Maria G. S. Araújo, Anna L. Garção, Stéphane Ponton, Peter Groenendijk, Giuliano M. Locosselli, Daigard R. O. Ortega-Rodriguez, Deoclecio J. Amorim, Fábio J. V. Costa, Gabriela B. Nardoto, Alexandre T. Brunello, Vladimir Eliodoro Costa, Gabriel Assis-Pereira, Mario Tomazello-Filho, Niro Higuchi, Ana C. Barbosa, João Paulo Sena-Souza, and Clément P. Bataille

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Short summary
Illegal logging is a major environmental concern in the Amazon. We tested whether the isotopic composition of carbon (δ13C) and nitrogen (δ15N) in wood can support timber traceability. Using machine-learning models, we generated basin-wide isoscapes showing that both isotopes capture consistent environmental gradients, providing a scientific basis to improve provenance verification and guide enforcement efforts.
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