Preprints
https://doi.org/10.5194/egusphere-2025-4844
https://doi.org/10.5194/egusphere-2025-4844
10 Oct 2025
 | 10 Oct 2025
Status: this preprint is open for discussion and under review for Biogeosciences (BG).

Fluvial biofilm phosphorus entrapment shifts from intracellular to extracellular dominance along a multifactorial longitudinal river gradient

Simon Wentritt, Markus Weitere, David Kneis, Karla Münzner, and Nuria Perujo

Abstract. Phosphorus (P) entrapment by biofilms can be distinguished into the intracellular P entrapment (the P uptake by microbial cells) and the extracellular P entrapment via the extracellular polymeric substances. It is unknown how these two P entrapment pathways behave in natural ecosystems in which gradients of environmental drivers such as P, labile dissolved organic matter (DOM) and light occur. Another key aspect in P dynamics at the sediment-water interface is microbial activity. Microbially mediated mineralization of DOM and microbial activity in general is suspected to be a driver of internal P mobilization from the sediments. Here we brought such expectations into a real-world context by analysing the P entrapment patterns of benthic biofilms and the P release potential from the sediments along a longitudinal gradient in a third order river in front of the background of key microbial metabolic variables. The gradient consists of increasing P availability, DOM lability and light availability.

We found a gradual shift in the dominance of P entrapment from higher intracellular P entrapment in the upstream biofilms to higher extracellular P entrapment in the downstream biofilms. This shift towards dominance of extracellular P entrapment was accompanied by an increase in the P release potential from the sediment. The increasing P release potential was also connected to high extracellular enzyme activity of alkaline phosphatase, an enzyme involved in the mineralization of P from organic compounds. We further found that a balanced ratio between intracellular and extracellular P was connected to a higher C metabolic diversity.

All this evidence suggests an influence of the benthic biofilms on P dynamics at the sediment-water interface. This research advocates for a more integrated perspective that accounts for both intracellular and extracellular biofilm-mediated processes.

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Simon Wentritt, Markus Weitere, David Kneis, Karla Münzner, and Nuria Perujo

Status: open (until 21 Nov 2025)

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Simon Wentritt, Markus Weitere, David Kneis, Karla Münzner, and Nuria Perujo
Simon Wentritt, Markus Weitere, David Kneis, Karla Münzner, and Nuria Perujo

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Short summary
We sampled biofilms along an increasing river gradient of light, phosphorus, and organic carbon to study phosphorus entrapment. Results show a shift from intracellular to extracellular dominance, which we linked to biofilm carbon metabolism and the sediment phosphorus release potential. This helps to uncover the role of benthic biofilms in phosphorus dynamics at the sediment–water interface.
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