Preprints
https://doi.org/10.5194/egusphere-2025-3818
https://doi.org/10.5194/egusphere-2025-3818
18 Nov 2025
 | 18 Nov 2025
Status: this preprint is open for discussion and under review for Geoscientific Model Development (GMD).

SIM-HOM (version 1.0): a Mechanistic Module for the formation of highly oxygenated organic molecules from Isoprene, Monoterpene and Sesquiterpene evaluated with ADCHAM (version 1.0)

Liwen Yang, Wei Nie, Mikael Ehn, Chao Yan, Lubna Dada, Yuliang Liu, Pontus Roldin, and Aijun Ding

Abstract. Biogenic volatile organic compounds (BVOCs), including isoprene, monoterpenes, and sesquiterpenes, are emitted in large quantities and play a critical role in atmospheric chemistry. They contribute to the formation of highly oxygenated organic molecules (HOM), which are essential for new particle formation (NPF) and secondary organic aerosol (SOA) formation. However, current models often oversimplify the oxidation pathways of these compounds, leading to inaccuracies in predicting HOM composition and concentrations. To address this gap, we developed a mechanistic module, SIM-HOM (Sesquiterpene, Isoprene and Monoterpene-derived HOM mechanism), based on Master Chemical Mechanism (MCM), that explicitly incorporates autoxidation processes, detailed fragmentation pathways, and RO2-RO2 interactions for isoprene, monoterpene, and sesquiterpenes. The updated module was validated using experimental data from the Cosmics Leaving OUtdoor Droplets (CLOUD) chamber, demonstrating substantial improvements in simulating HOM concentrations under various conditions. Specifically, it significantly improves the simulation of highly oxidized isoprene products, resolves discrepancies in monoterpene-derived HOM distributions, and provides the first comprehensive parameterization of sesquiterpene oxidation products. The model also captures the HOM formation under mixed precursor conditions. These advancements underscore the importance of incorporating detailed molecular-level reaction mechanisms into atmospheric models. Future work should focus on refining branching ratios for critical reactions and investigating the influence of temperature and nitrogen oxides on HOM formation, and expanding the mechanism to include additional BVOC classes. Our findings provide a robust foundation for improving global atmospheric simulations of SOA formation and climate interactions.

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Liwen Yang, Wei Nie, Mikael Ehn, Chao Yan, Lubna Dada, Yuliang Liu, Pontus Roldin, and Aijun Ding

Status: open (until 13 Jan 2026)

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Liwen Yang, Wei Nie, Mikael Ehn, Chao Yan, Lubna Dada, Yuliang Liu, Pontus Roldin, and Aijun Ding
Liwen Yang, Wei Nie, Mikael Ehn, Chao Yan, Lubna Dada, Yuliang Liu, Pontus Roldin, and Aijun Ding
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Latest update: 18 Nov 2025
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Short summary
SIM-HOM (Sesquiterpene, Isoprene and Monoterpene-derived Highly Oxygenated organic Molecules) is a mechanistic module that fully simulates HOM formation from key biogenic precursors, unlocking hidden chemistry that shapes clouds and climate. It captures the role of isoprene-derived products in seeding upper-troposphere clouds, quantifies low-volatility compounds driving aerosol formation, and provides quasi-molecular resolution to link gas-phase chemistry to aerosol impacts.
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