the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Anaerobic biodegradation of Miocene lignites from an opencast mine by autochthonous microorganisms stimulated under laboratory conditions
Abstract. The supplementation and provision of appropriate nutrients to microorganisms, which are often lacking in the natural environment are essential and critical for microbial growth. One such element is nitrogen, most of which is found in the Earth's atmosphere. In this study, we present evidence of nitrogen processing and anaerobic N2-fixation by microorganisms naturally present in sedimentary organic matter. Miocene detritic lignite from the opencast mine was incubated under anaerobic conditions in the dark (headspace atmosphere 85 % N2, 10 % CO2, 5 % H2) for three years. The natural microbial community of these coal materials was stimulated for growth through the addition of trace elements, vitamins, and carbon-bearing compounds such as yeast extract, nutrient broth, methanol, and sodium acetate. A visual indicator of microbial activity was observed as the color of the fermentation solutions changed over time: from colorless to light yellow (after 3 months), dark brown (after 6 months), and finally black (after more than 1 year). This progression suggests the dissolution of fulvic and humic acids. At the end of the cultivation period, the total nitrogen (TN) and total inorganic nitrogen (TIN) contents in the solutions were significantly reduced whereas in incubations with sodium acetate, total organic nitrogen (TON) content significantly increased compared to the initial levels. In most cases, total carbon (TC) content significantly increased due to biodegradation, except for the incubations where methanol was added. A GC-MS analysis of the total extracts from lignite revealed that the main macromolecule decomposed by microorganisms was lignin, along with its diagenetic derivatives. The biogas released during the process contained CO2 and trace amounts of CH4 (up to 50 ppm). Isotopic data indicated the occurrence of anaerobic CH4 oxidation. Notably, 16S rRNA gene sequencing identified the presence of N2-fixing microorganisms in all investigated samples, members of the order Rhizobiales (families Beijerinckiaceae, Rhizobiaceae). Our findings demonstrate that N2-fixation may play a pivotal role in coal decomposition under anaerobic conditions.
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Status: open (until 23 May 2025)
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RC1: 'Comment on egusphere-2025-236', Anonymous Referee #1, 20 Mar 2025
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The manuscript by Bucha et al. described lignite degradation in a microcosm supplemented by nutrients. The authors set 12 conditions of incubations (each two replicates) that varied in nutrient additions and compared the difference in gaseous components and in-liquid carbon and nitrogen species in the incubations. The key point in this study was the comparison among different incubation conditions to find factors affecting the anaerobic degradation of lignite. Thus, the statistically validated comparisons of incubations are critically necessary. Unfortunately, the presented results lack the statistical significance necessary to draw valid conclusions from the experiments. The only "standard deviation" I could find in this manuscript was in line 142, which seemed to be standard deviations of analytical standard measurements. The authors described placing "around 10g" of lignite samples in their vials, which indicated an uncertainty in the precision of replicates in preparation for the incubation. In addition, the natural heterogeneity of the used lignite should add another layer of the experimental error. Even with this situation, the authors did not show any measurements on any of the replications. I do not understand why the authors prepared only two replicates, which cannot give a good standard deviation and, thus, statistical significance. Therefore, I was not entirely convinced by the authors' claim that the data variation was caused by the incubation conditions. Clear statistical validity is needed to exclude the possibility of an error in the experimental setup as a cause of the variation. As written above, this is critical to assess the validity of the experimental data shown and needs to be carefully addressed.
Specific comments;
- 142: What standard deviation did the authors mention here? Is it the standard deviation of repeated analysis of the same standard? Or analysis of replicates of the standard? Clarification is necessary.
- 187: Have the authors checked the cell extraction recovery? What gravity force the 120 rpm centrifugation, and why was 250xg centrifugation added to it?
- 263-266: Methane concentration of M9 only condition was 37.2, and 47.2 was for MG.
- 266-267: Is there any possibility of just a release of coal-bearing methane?
- 288 and Table 3: Is T1 3 years time point? What does "END" mean?
- 341: What denote the "1" for each condition?
Citation: https://doi.org/10.5194/egusphere-2025-236-RC1
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