Preprints
https://doi.org/10.5194/egusphere-2024-3706
https://doi.org/10.5194/egusphere-2024-3706
09 Dec 2024
 | 09 Dec 2024

Nitrate reduction in groundwater as an overlooked source of agricultural CO2 emissions

Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen

Abstract. Nitrate pollution from agriculture poses a global environmental and public health threat. Nitrate levels in water can be reduced through denitrification, which increases dissolved inorganic carbon (DIC) via organic carbon mineralization and/or carbonate dissolution. This DIC potentially acts as a net anthropogenic source to atmospheric CO2; however, its overall impact remains unclear. This study quantified CO2 production from denitrification in Denmark, utilizing extensive observational datasets and national-scale modelling tools. We identified dominant denitrification processes in groundwater and predicted a national process map. Our results indicate that hydrogeology plays a central role in determining the dominant processes. CO2 production from denitrification in groundwater varied spatially, depending on nitrogen leaching and the denitrification processes. We estimated that denitrification in groundwater produces about 204 kt of CO2-eq. yr-1 as DIC, and ~50 % would be emitted to atmosphere. The Intergovernmental Panel on Climate Change (IPCC) guidelines account CO2 emissions related to agriculture from liming, urea, and other C-containing fertilizers, and these were 250, 1 and 4 kt of CO2-eq. yr-1, respectively, for Denmark in 2020. Although CO2 is a minor agricultural GHG emission (2 % of the total), our findings suggest that the agricultural GHG inventories should include denitrification-related CO2 emissions.

Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.
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Journal article(s) based on this preprint

04 Sep 2025
A national-scale redox clustering for quantifying CO2 emissions from groundwater denitrification
Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen
Biogeosciences, 22, 4387–4403, https://doi.org/10.5194/bg-22-4387-2025,https://doi.org/10.5194/bg-22-4387-2025, 2025
Short summary
Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2024-3706', Anonymous Referee #1, 16 Dec 2024
    • AC2: 'Reply on RC1', Hyojin Kim, 27 Feb 2025
  • RC2: 'Comment on egusphere-2024-3706', Anonymous Referee #2, 12 Feb 2025

Interactive discussion

Status: closed

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
  • RC1: 'Comment on egusphere-2024-3706', Anonymous Referee #1, 16 Dec 2024
    • AC2: 'Reply on RC1', Hyojin Kim, 27 Feb 2025
  • RC2: 'Comment on egusphere-2024-3706', Anonymous Referee #2, 12 Feb 2025

Peer review completion

AR: Author's response | RR: Referee report | ED: Editor decision | EF: Editorial file upload
ED: Reconsider after major revisions (24 Mar 2025) by Gabriel Singer
AR by Hyojin Kim on behalf of the Authors (28 Apr 2025)  Author's response   Author's tracked changes   Manuscript 
ED: Referee Nomination & Report Request started (29 Apr 2025) by Gabriel Singer
RR by Anonymous Referee #1 (30 Apr 2025)
RR by Anonymous Referee #2 (28 May 2025)
ED: Publish subject to minor revisions (review by editor) (28 May 2025) by Gabriel Singer
AR by Hyojin Kim on behalf of the Authors (03 Jun 2025)  Author's response   Author's tracked changes   Manuscript 
ED: Publish as is (05 Jun 2025) by Gabriel Singer
AR by Hyojin Kim on behalf of the Authors (11 Jun 2025)  Manuscript 

Journal article(s) based on this preprint

04 Sep 2025
A national-scale redox clustering for quantifying CO2 emissions from groundwater denitrification
Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen
Biogeosciences, 22, 4387–4403, https://doi.org/10.5194/bg-22-4387-2025,https://doi.org/10.5194/bg-22-4387-2025, 2025
Short summary
Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen
Hyojin Kim, Julian Koch, Birgitte Hansen, and Rasmus Jakobsen

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Short summary
Nitrate pollution from farming is a global issue. Denitrification, a natural process that reduces nitrate, also releases CO2, contributing to climate change. This study found that groundwater denitrification is a significant CO2 source from Danish agriculture, and it is comparable to other reported sources. These emissions have been overlooked in greenhouse gas inventories, highlighting the need to update guidelines for more accurate reporting of agricultural emissions.
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