<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "https://jats.nlm.nih.gov/nlm-dtd/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" specific-use="SMUR" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">EGUsphere</journal-id>
<journal-title-group>
<journal-title>EGUsphere</journal-title>
<abbrev-journal-title abbrev-type="publisher">EGUsphere</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">EGUsphere</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub"></issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/egusphere-2026-2228</article-id>
<title-group>
<article-title>Ground-truthing the application of compound-specific stable isotopes of amino acids to planktic foraminifera tests from Santa Barbara Basin</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Doherty</surname>
<given-names>Shannon C.</given-names>
<ext-link>https://orcid.org/0000-0003-3785-8759</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Havard</surname>
<given-names>Emily</given-names>
<ext-link>https://orcid.org/0009-0003-0802-6117</ext-link>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Christensen</surname>
<given-names>Stephanie</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Pugsley</surname>
<given-names>Genevieve M.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>McCarthy</surname>
<given-names>Matthew D.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Davis</surname>
<given-names>Catherine V.</given-names>
<ext-link>https://orcid.org/0000-0003-4279-5369</ext-link>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Fairbanks, AK</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Department of Marine, Earth, and Atmospheric Sciences, North Carolina State University, Raleigh, NC</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Department of Ocean Sciences, University of California, Santa Cruz, Santa Cruz, CA</addr-line>
</aff>
<aff id="aff4">
<label>4</label>
<addr-line>School of Aquatic and Fisheries Science, University of Washington, Seattle, WA</addr-line>
</aff>
<pub-date pub-type="epub">
<day>23</day>
<month>04</month>
<year>2026</year>
</pub-date>
<volume>2026</volume>
<fpage>1</fpage>
<lpage>36</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2026 Shannon C. Doherty et al.</copyright-statement>
<copyright-year>2026</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://egusphere.copernicus.org/preprints/2026/egusphere-2026-2228/">This article is available from https://egusphere.copernicus.org/preprints/2026/egusphere-2026-2228/</self-uri>
<self-uri xlink:href="https://egusphere.copernicus.org/preprints/2026/egusphere-2026-2228/egusphere-2026-2228.pdf">The full text article is available as a PDF file from https://egusphere.copernicus.org/preprints/2026/egusphere-2026-2228/egusphere-2026-2228.pdf</self-uri>
<abstract>
<p>Planktic foraminifera form shells that are preserved in ocean sediments and are used in a variety of paleoproxy and biostratigraphic applications. However, species-specific ecology can complicate the interpretation of planktic foraminifera-based proxies, and limited options exist for examining the ecology of extinct species. Here we apply test-bound compound-specific stable isotopes of amino acids (CSI-AA) to examine the trophic ecology of extant planktic foraminifera. We measure CSI-AA in planktic foraminifera shells collected in sediment traps from the Santa Barbara Basin, CA, specifically the three most abundant species in this region: &lt;em&gt;Globigerina bulloides&lt;/em&gt;, &lt;em&gt;Neogloboquadrina incompta&lt;/em&gt;, and &lt;em&gt;Turborotalita quinqueloba&lt;/em&gt;. The nitrogen CSI-AA of all three species suggest that planktic foraminifera have metazoan-like metabolisms, and that trophic position estimates using CSI-AA are appropriate for planktic foraminifera. All three species had trophic positions near 2 (primary consumer), with no evidence for mixotrophy or photosymbionts. Carbon CSI-AA, in combination with a Bayesian stable isotope mixing model, indicates that the three species occupied separate niches based on diet. &lt;em&gt;Globigerina bulloides&lt;/em&gt; fed opportunistically on all groups of phytoplankton available in Santa Barbara Basin, adjusting its diet with seasonal changes in phytoplankton assemblage. &lt;em&gt;Turborotalita quinqueloba&lt;/em&gt; specialized in diatoms and heterotrophic bacteria. &lt;em&gt;Neogloboquadrina incompta&lt;/em&gt; consumed heterotrophic bacteria and some phytoplankton. Our results align with the current understanding of each species&amp;rsquo; ecology while further defining their niches. Our findings suggest that CSI-AA is a promising tool for understanding the trophic ecology of planktic foraminifera, and we make recommendations for future applications of CSI-AA to fossil specimens.</p>
</abstract>
<counts><page-count count="36"/></counts>
<funding-group>
<award-group id="gs1">
<funding-source>National Science Foundation</funding-source>
<award-id>OCE 2303608</award-id>
<award-id>OCE 2223074</award-id>
<award-id>OCE 2303609</award-id>
</award-group>
</funding-group>
</article-meta>
</front>
<body/>
<back>
</back>
</article>